I'm interested in computer vision, deep learning, and image processing. Much of my research is about applying deep learning models on MR images where I investigated domain adaptation, image segmentaion, registration, and generative models.
[05/26] Our work MRecover β recovering motion-corrupted MRI with AI-generated contrast β is on arXiv! [project page]
[04/26] Won 3rd place at the University of Pittsburgh Big Idea Competition!
[10/25] Our white-matter lesion sampling workflow was published in the Journal of Neuroimaging!
[02/24] Our wmh_seg paper β robust WMH segmentation across 1.5T/3T/7T β is on arXiv!
[09/23] Our deep learning based facial recognition system won the track prize at the Pitt Challenge hackathon 2023.
[05/23] Our work on leveraging T1/T2 ratio on brain age prediction was accepted by MIDL short paper track!
[04/23] Nominated as the best department TA of the year :)
[02/23] Our abstract work on domain adaptation and post mortem imagery alignment were accepted by ISMRM!
[06/22] I passed my preliminary exam without condition!
[04/21] I accepted my bioengineering GSR letter from the University of Pittsburgh
Paper
MRecover: A Conditional Generative Model for Recovering Motion-Corrupted MR Images Using AI Generated Contrast Jinghang Li, Tales Santini, Courtney Clark, Bruno de Almeida, Cong Chu, Salem Alkhateeb, et al., Howard Aizenstein, Minjie Wu, Tamer S. Ibrahim
A conditional generative model that synthesizes T2w-TSE contrast from routinely acquired T1w images, recovering motion-corrupted hippocampal MRI without re-scanning. 7Tβ3T transfer reaches subfield-volume correlation r=0.87β0.97 and improves analyzable subjects by 31.8%, with under 30 s full-volume single-step inference.
wmh_seg: Transformer based U-Net for Robust and Automatic White Matter Hyperintensity Segmentation across 1.5 T, 3T and 7T. Jinghang Li, Tales Santini, Yuanzhe Huang, Tamer Ibrahim, Howard Aizenstein, Minjie Wu
We leveraged a SegFormer backbone with heavy MR data augmentation for white matter hyperintensity segmentation on 1.5T, 3T, and 7T FLAIR images. Our model offers the most accurate segmentations on 7T FLAIR images.
Investigate Sex Dimorphism of Cerebral Myelination Across Lifespan by Leveraging Conditional Variational Autoencoder Jinghang Li, Linghang Wang, Chang-le Chen, Tamer Ibrahim, Howard Aizenstein, Minjie Wu
We implemented a 3-D cVAE conditioned on age, trained on the T1/T2 ratio image (a proxy for overall white-matter health), and used it to investigate sex differences in white-matter aging.
An Open 60-channel Tx/ 32-channel Rx RF Coil System for Routine Use at 7T
Andrea Sajewski, Tales Santini, Anthony DeFranco, Boris Keil, Hecheng Jin, Jacob Berardinelli, Jinghang Li, Cong Chu, Tiago Martins, and Tamer Ibrahim
ISMRM, Toronto, Canada 2023 (Oral Presentation, Magna Cum Laude Merit Award)
Hippocampal Subfields Volume in Middle Age Healthy Adults
Salem Alkhateeb, Tales Santini, Jinghang Li, Robin Chu, Daniel Ibrahim, Anna Marsland, Stephen Manuck, Pete Gianaros, and Tamer Ibrahim.
ISMRM, London, United Kingdom 2022
Investigating white matter hyperintensities in a multicenter COVID-19 study using 7T MRI Jinghang Li, Jr-Jiun Liou, Tales Santini, Salem Alkateeb, Oluwatobi Adeyemi, Gabriel Erausquin, Valentina Garbarino, Monica Goss, Mohamad Habes, Jayandra Himali, Christof Karmonik, Karl Li, Joseph Masdeu, Rejani Nair, Vibhuti Patel, Beth Snitz, Howard Aizenstein, Minjie Wu , Richard Bowtell, Gowland Penny, Gustavo Roman, Mary Ganguli, Farhaan Vahidy, Timothy Girard, Heidi Jacobs Akram Hosseini, Sudha Seshadri and Tamer Ibrahim.
AAIC, Amsterdam, Netherland 2023 (Oral Presentation)
Teaching
Teaching Assistant
BIOENG 1680: BIOMEDICAL APPLC OF CONTROL | Spring 2023
BIOENG 1320: BIOLOGICAL SIGNALS AND SYSTEMS | Fall 2022